BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D12LP1|AL430542
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1496 1233 0.0
>3x_Contig1496
Length = 9544
Score = 1233 bits (621), Expect = 0.0
Identities = 649/655 (99%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 309 gaaaagttatcctgctaatagataaagttggccaaatgaagatttccaacgaagaatctg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gaaaagttatcctgctaatagataaagttggccaaatgaagatttccaacgaagaatctg 336
Query: 369 ctagggactcgagagctatccagatagcaggaaaaggaaagttgctaagagagcatgcct 428
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctagggactcgag-gc-atccagatagcaggaaaaggaaagttgctaagagagcatgcct 394
Query: 429 cgcttgtcgagagagaaagattaaatgtgacggtgaggctaatccagatccgagcggtgg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cgcttgtcgagagagaaagattaaatgtgacggtgaggctaatccagatccgagcggtgg 454
Query: 489 gcctggaaaatgcactaactgtgttcgtagcactcttgaatgtgtttttgtcgccagtta 548
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 455 gcctggaaaatgcactaactgtgttcgtagcactcttgaatgtgtttttgtcgccagtaa 514
Query: 549 tcgtggtggtagaagagtatttgataaatcgaagcggtatatatcaccgcctagttccga 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tcgtggtggtagaagagtatttgataaatcgaagcggtatatatcaccgcctagttccga 574
Query: 609 tgtgtgctcagtcttggcagaaagtgctgttaaaagccagaaggtcgatatttgtgtatc 668
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 575 tgtgtgcccagtcttggcagaaagtgctgttaaaagccagaaggtcgatatttgtg-atc 633
Query: 669 cccctaatccactttgtagcagtaactcatctgttttgggtagcagccataatctaccag 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cccctaatccactttgtagcagtaactcatctgttttgggtagcagccataatctaccag 693
Query: 729 tacggccctatttaagagccatcacttcaagtgcaaagtttcccactcgtctgtscggta 788
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 694 tacggccctatttaagagccatcacttcaagtgcaaagtttcccactcgtctgtccggta 753
Query: 789 caccagccagcattcatgactcgattcccaataacaacaatgggctaatgacacatcctc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 caccagccagcattcatgactcgattcccaataacaacaatgggctaatgacacatcctc 813
Query: 849 tatccaatcactccaaaccacaacagcgatcaaaaacccaacaccagcatcaatcaagtt 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tatccaatcactccaaaccacaacagcgatcaaaaacccaacaccagcatcaatcaagtt 873
Query: 909 acccaaactctccgcataattttgtactgccacagctcacgctggagaatcacca 963
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 acccaaactctccgcataattttgtactgccacagctcacgctggagaatcacca 928
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6433
Number of Sequences: 1807
Number of extensions: 6433
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)